• DocumentCode
    1386613
  • Title

    Graph Run-Length Matrices for Histopathological Image Segmentation

  • Author

    Tosun, Akif Burak ; Gunduz-Demir, Cigdem

  • Author_Institution
    Dept. of Comput. Eng., Bilkent Univ., Ankara, Turkey
  • Volume
    30
  • Issue
    3
  • fYear
    2011
  • fDate
    3/1/2011 12:00:00 AM
  • Firstpage
    721
  • Lastpage
    732
  • Abstract
    The histopathological examination of tissue specimens is essential for cancer diagnosis and grading. However, this examination is subject to a considerable amount of observer variability as it mainly relies on visual interpretation of pathologists. To alleviate this problem, it is very important to develop computational quantitative tools, for which image segmentation constitutes the core step. In this paper, we introduce an effective and robust algorithm for the segmentation of histopathological tissue images. This algorithm incorporates the background knowledge of the tissue organization into segmentation. For this purpose, it quantifies spatial relations of cytological tissue components by constructing a graph and uses this graph to define new texture features for image segmentation. This new texture definition makes use of the idea of gray-level run-length matrices. However, it considers the runs of cytological components on a graph to form a matrix, instead of considering the runs of pixel intensities. Working with colon tissue images, our experiments demonstrate that the texture features extracted from “graph run-length matrices” lead to high segmentation accuracies, also providing a reasonable number of segmented regions. Compared with four other segmentation algorithms, the results show that the proposed algorithm is more effective in histopathological image segmentation.
  • Keywords
    biological tissues; cancer; cellular biophysics; feature extraction; image segmentation; image texture; medical image processing; cancer diagnosis; cancer grading; colon tissue imaging; computational quantitative tools; cytological tissue components; graph run-length matrices; gray-level run-length matrices; histopathological image segmentation; histopathological tissue imaging; pixel intensities; robust algorithm; texture feature extraction; tissue organization; visual interpretation; Cancer; Colon; Glands; Image color analysis; Image edge detection; Image segmentation; Pixel; Cancer; graphs; histopathological image analysis; image segmentation; image texture analysis; perceptual image segmentation; Algorithms; Artificial Intelligence; Colon; Colorectal Neoplasms; Humans; Image Enhancement; Image Interpretation, Computer-Assisted; Microscopy; Pattern Recognition, Automated; Reproducibility of Results; Sensitivity and Specificity;
  • fLanguage
    English
  • Journal_Title
    Medical Imaging, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0278-0062
  • Type

    jour

  • DOI
    10.1109/TMI.2010.2094200
  • Filename
    5643152