• DocumentCode
    1392843
  • Title

    Quantifying evolvability in small biological networks

  • Author

    Mugler, A. ; Ziv, E. ; Nemenman, I. ; Wiggins, C.H.

  • Author_Institution
    Dept. of Phys., Columbia Univ., New York, NY, USA
  • Volume
    3
  • Issue
    5
  • fYear
    2009
  • fDate
    9/1/2009 12:00:00 AM
  • Firstpage
    379
  • Lastpage
    387
  • Abstract
    The authors introduce a quantitative measure of the capacity of a small biological network to evolve. The measure is applied to a stochastic description of the experimental setup of Guet et al. (Science 2002, 296, pp. 1466), treating chemical inducers as functional inputs to biochemical networks and the expression of a reporter gene as the functional output. The authors take an information-theoretic approach, allowing the system to set parameters that optimise signal processing ability, thus enumerating each network´s highest-fidelity functions. All networks studied are highly evolvable by the measure, meaning that change in function has little dependence on change in parameters. Moreover, each network´s functions are connected by paths in the parameter space along which information is not significantly lowered, meaning a network may continuously change its functionality without completely losing it along the way. This property further underscores the evolvability of the networks.
  • Keywords
    biochemistry; biocybernetics; evolution (biological); information theory; molecular biophysics; biochemical network functional inputs; chemical inducers; evolvability quantification; functional output; information theoretic approach; parameter space; reporter gene expression; small biological networks;
  • fLanguage
    English
  • Journal_Title
    Systems Biology, IET
  • Publisher
    iet
  • ISSN
    1751-8849
  • Type

    jour

  • DOI
    10.1049/iet-syb.2008.0165
  • Filename
    5243215