• DocumentCode
    1478142
  • Title

    Multilevel Segmentation of Histopathological Images Using Cooccurrence of Tissue Objects

  • Author

    Simsek, Ahmet Cagri ; Tosun, Akif Burak ; Aykanat, Cevdet ; Sokmensuer, Cenk ; Gunduz-Demir, Cigdem

  • Author_Institution
    Dept. of Comput. Eng., Bilkent Univ., Ankara, Turkey
  • Volume
    59
  • Issue
    6
  • fYear
    2012
  • fDate
    6/1/2012 12:00:00 AM
  • Firstpage
    1681
  • Lastpage
    1690
  • Abstract
    This paper presents a new approach for unsupervised segmentation of histopathological tissue images. This approach has two main contributions. First, it introduces a new set of high-level texture features to represent the prior knowledge of spatial organization of the tissue components. These texture features are defined on the tissue components, which are approximately represented by tissue objects, and quantify the frequency of two component types being cooccurred in a particular spatial relationship. As they are defined on components, rather than on image pixels, these object cooccurrence features are expected to be less vulnerable to noise and variations that are typically observed at the pixel level of tissue images. Second, it proposes to obtain multiple segmentations by multilevel partitioning of a graph constructed on the tissue objects and combine them by an ensemble function. This multilevel graph partitioning algorithm introduces randomization in graph construction and refinements in its multilevel scheme to increase diversity of individual segmentations, and thus, improve the final result. The experiments on 200 colon tissue images reveal that the proposed approach-the object cooccurrence features together with the multilevel segmentation algorithm-is effective to obtain high-quality results. The experiments also show that it improves the segmentation results compared to the previous approaches.
  • Keywords
    biological tissues; feature extraction; graph theory; image segmentation; image texture; medical image processing; ensemble function; graph construction; high-level texture feature; histopathological tissue image; multilevel graph partitioning algorithm; multilevel partitioning; multilevel segmentation algorithm; object cooccurrence feature; spatial organization; tissue components; tissue objects; unsupervised segmentation; Biomedical imaging; Bipartite graph; Classification algorithms; Feature extraction; Image segmentation; Partitioning algorithms; Training; Histopathological image analysis; image segmentation; multilevel segmentation; segmentation ensemble; texture; Adenocarcinoma; Algorithms; Biopsy; Colonic Neoplasms; Humans; Image Enhancement; Image Interpretation, Computer-Assisted; Pattern Recognition, Automated; Reproducibility of Results; Sensitivity and Specificity;
  • fLanguage
    English
  • Journal_Title
    Biomedical Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9294
  • Type

    jour

  • DOI
    10.1109/TBME.2012.2191784
  • Filename
    6174459