• DocumentCode
    1504566
  • Title

    Automatic Generation of Multicore Chemical Kernels

  • Author

    Linford, John C. ; Michalakes, John ; Vachharajani, Manish ; Sandu, Adrian

  • Author_Institution
    Dept. of Comput. Sci., Virginia Polytech. Inst. & State Univ., Blacksburg, VA, USA
  • Volume
    22
  • Issue
    1
  • fYear
    2011
  • Firstpage
    119
  • Lastpage
    131
  • Abstract
    Abstract-This work presents the Kinetics Preprocessor: Accelerated (KPPA), a general analysis and code generation tool that achieves significantly reduced time-to-solution for chemical kinetics kernels on three multicore platforms: NVIDIA GPUs using CUDA, the Cell Broadband Engine, and Intel Quad-Core Xeon CPUs. A comparative performance analysis of chemical kernels from WRFChem and the Community Multiscale Air Quality Model (CMAQ) is presented for each platform in double and single precision on coarse and fine grids. We introduce the multicore architecture parameterization that KPPA uses to generate a chemical kernel for these platforms and describe a code generation system that produces highly tuned platform-specific code. Compared to state-of-the-art serial implementations, speedups exceeding 25x are regularly observed, with a maximum observed speedup of 41.1x in single precision.
  • Keywords
    atmospheric chemistry; chemistry computing; environmental science computing; microprocessor chips; multiprocessing systems; parallel architectures; program compilers; reaction kinetics; software tools; CMAQ; CUDA; Intel Quad-Core Xeon CPUs; KPPA; NVIDIA GPU; WRF-Chem; automatic generation; cell broadband engine; chemical kinetics kernel; code generation tool; community multiscale air quality model; kinetics preprocessor accelerated; multicore architecture; multicore chemical kernel; Atmospheric modeling; Chemical analysis; Chemistry; Computational modeling; Computer architecture; Engines; Kernel; Kinetic theory; Meteorology; Predictive models; CMAQ.; Cell Broadband Engine; KPPA; Kinetics PreProcessor; NVIDIA CUDA; OpenMP; WRF-Chem; atmospheric modeling; chemical kinetics; multicore;
  • fLanguage
    English
  • Journal_Title
    Parallel and Distributed Systems, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    1045-9219
  • Type

    jour

  • DOI
    10.1109/TPDS.2010.106
  • Filename
    5473221