• DocumentCode
    151659
  • Title

    DNA inspired bi-directional Lempel-Ziv-like compression algorithms

  • Author

    Mahmood, Arif ; Islam, Nahina ; Nigatu, Dawit ; Henkel, Werner

  • Author_Institution
    Electr. Eng. & Comput. Sci., Jacobs Univ. Bremen, Bremen, Germany
  • fYear
    2014
  • fDate
    18-22 Aug. 2014
  • Firstpage
    162
  • Lastpage
    166
  • Abstract
    The bi-directional reading processes in DNA replication and gene expression together with the similarities between the so-called alternative splicing and Lempel-Ziv (LZ) algorithms has motivated us to incorporate bi-directional readings into LZ algorithms. LZ77, LZ78, and LZW84 are universal lossless data compression algorithms. A modified version of these algorithms that takes into account both forward and reverse readings is presented in this work. It is shown that bi-directional reading can improve the compression ratio at the expense of slight modifications in LZ algorithms provided that there exists some symmetry in the information content. Results are presented for text, image, and audio files.
  • Keywords
    biocomputing; data compression; DNA replication; alternative splicing algorithm; audio files; bi-directional Lempel-Ziv-like compression algorithms; gene expression; image files; text files; universal lossless data compression algorithms; Bidirectional control; DNA; Dictionaries; Image coding; Indexes; Proteins; RNA;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Turbo Codes and Iterative Information Processing (ISTC), 2014 8th International Symposium on
  • Conference_Location
    Bremen
  • Type

    conf

  • DOI
    10.1109/ISTC.2014.6955106
  • Filename
    6955106