Title :
On the pattern recognition of noisy subsequence trees
Author :
Oommen, B. John ; Loke, Richard K S
Author_Institution :
Sch. of Comput. Sci., Carleton Univ., Ottawa, Ont., Canada
fDate :
9/1/2001 12:00:00 AM
Abstract :
We consider the problem of recognizing ordered labeled trees by processing their noisy subsequence-trees which are “patched-up” noisy portions of their fragments. We assume that H, a finite dictionary of ordered labeled trees, is given. X* is an unknown element of H, and U is any arbitrary subsequence-tree of X*. We consider the problem of estimating X* by processing Y, which is a noisy version of U. The solution which we present is, to our knowledge, the first reported solution to the problem. We solve the problem by sequentially comparing Y with every element X of H, the basis of comparison being a new dissimilarity measure between two trees, which implicitly captures the properties of the corrupting mechanism that noisily garbles U into Y. The algorithm which incorporates this constraint has been used to test our pattern recognition system, and the experimental results obtained demonstrate good accuracy
Keywords :
pattern recognition; trees (mathematics); accuracy; labeled ordered trees; noisy subsequence trees; pattern recognition; subtree recognition; Bioinformatics; Dictionaries; Drugs; Genomics; Humans; Mechanical factors; Pattern recognition; Pharmaceuticals; Sequential analysis; System testing;
Journal_Title :
Pattern Analysis and Machine Intelligence, IEEE Transactions on