Title :
Validating models of bacterial chemotaxis by simulating the random motility coefficient
Author :
Zhiyu Wang ; MinJun Kim ; Rosen, Gail
Author_Institution :
Dept. of Electr. & Comput. Eng., Drexel Univ., Philadelphia, PA
Abstract :
In order to characterize the random walk of E. coli, biologists have studied several parameters, such as the motility speed, run duration, and random motility coefficient. Previously, biologists indicated that the probability distributions of these parameters may vary depending on the presence or absence of a chemical gradient in the environment. For instance, in a gradient, the cell of E. coli exhibits a biased-random walk. Although it is suggested that the parameter distributions change from unbiased to biased conditions, there are contradicting reports of the actual distributions since they are usually derived from observations of cell movement. In this paper, we consider the problem conversely. We try hypotheses for the parameter distributions respectively for the unbiased and biased cases to simulate random walks. Then we can validate our chemotaxis model through the simulated random motility coefficient, under unbiased and biased environments.
Keywords :
biochemistry; cell motility; microorganisms; random processes; statistical distributions; E. coli; bacterial chemotaxis model; biased-random walk; chemical gradient; parameter distributions; probability distributions; random motility coefficient; Biological system modeling; Chemicals; Displays; Drives; Mathematical model; Microorganisms; Microscopy; Probability distribution; Propulsion; Tracking; Chemotaxis; E. coli; Random motility coefficient; Random walk;
Conference_Titel :
BioInformatics and BioEngineering, 2008. BIBE 2008. 8th IEEE International Conference on
Conference_Location :
Athens
Print_ISBN :
978-1-4244-2844-1
Electronic_ISBN :
978-1-4244-2845-8
DOI :
10.1109/BIBE.2008.4696658