• DocumentCode
    1652941
  • Title

    Inferring Gene Regulatory Networks using Heterogeneous Microarray Data Sets

  • Author

    Huang, Xiao Bing ; Zhao, Tian

  • Author_Institution
    Dept. of Electr. Eng. & Comput. Sci., Univ. of Wisconsin-Milwaukee, Milwaukee, WI
  • fYear
    2008
  • Firstpage
    518
  • Lastpage
    522
  • Abstract
    Inferring Gene Regulatory Networks (GRNs) is critical in describing the intrinsic relationship between genes in the course of evolution and discovering group behaviors of a certain set of genes. Recent development on high-throughput technique, microarray, provides researchers a chance to monitor the expression patterns of thousands of genes simultaneously. While increasing amount of microarray data sets are becoming available online, the integration of multiple microarray data sets from various data sources (e.g. different tissues, species, and conditions) for GRNs inference becomes very important in order to achieve more accurate and reliable GRNs modeling. This paper will review recent developments on integrating multiple microarray data sets and propose a new method to infer GRNs using multiple microarray data sets.
  • Keywords
    biological techniques; biology computing; genetics; molecular biophysics; GRN inference; gene expression patterns; gene group behaviors; heterogeneous microarray data sets; high throughput technique; inferring gene regulatory networks; multiple microarray data set integration; Bioinformatics; Computerized monitoring; Differential equations; Gene expression; Genetics; Inference algorithms; Jacobian matrices; Organisms; Proteins; Sparse matrices;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedical Engineering, 2008. ICBBE 2008. The 2nd International Conference on
  • Conference_Location
    Shanghai
  • Print_ISBN
    978-1-4244-1747-6
  • Electronic_ISBN
    978-1-4244-1748-3
  • Type

    conf

  • DOI
    10.1109/ICBBE.2008.126
  • Filename
    4535006