• DocumentCode
    1658201
  • Title

    The Benefit of Decomposing POMDP for Control of Gene Regulatory Networks

  • Author

    Erdogdu, Utku ; Alhajj, Reda ; Polat, Faruk

  • Author_Institution
    Dept. of Comput. Sci., Univ. of Calgary, Calgary, AB, Canada
  • Volume
    2
  • fYear
    2011
  • Firstpage
    381
  • Lastpage
    385
  • Abstract
    Controlling genes and interactions between them is an example real life problem that exhibits partial observability and can be modelled with POMDP framework. In this work, we explore the feasibility of realizing the genes related problem in POMDP framework. Current works addressing partial observability focus on formulating algorithms for the finite horizon gene regulatory network control problem. This motivated us to take the challenge and tackle the control problem from a real infinite horizon partially observable perspective. In other words, the method proposed in this work is a POMDP formulation for the infinite horizon version of the problem. This formulation first decomposes the problem by isolating different unrelated parts of the problem, and then makes use of existing POMDP solvers to solve the obtained sub problems, the final outcome is a control mechanism for the main problem.
  • Keywords
    Markov processes; genetics; POMDP decomposition benefit; finite horizon gene regulatory network control problem; infinite horizon partially observable perspective; partially observable Markov decision process; Data analysis; Educational institutions; Gene expression; Joints; Markov processes; Observability; Probabilistic logic;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Web Intelligence and Intelligent Agent Technology (WI-IAT), 2011 IEEE/WIC/ACM International Conference on
  • Conference_Location
    Lyon
  • Print_ISBN
    978-1-4577-1373-6
  • Electronic_ISBN
    978-0-7695-4513-4
  • Type

    conf

  • DOI
    10.1109/WI-IAT.2011.216
  • Filename
    6040662