Title :
HEp-2 Cell Classification with Heterogeneous Classes-Processes Based on K-Nearest Neighbours
Author :
Donato, Cascio ; Vincenzo, Taormina ; Marco, Cipolla ; Francesco, Fauci ; Maria, Vasile Simone ; Giuseppe, Raso
Author_Institution :
Dipt. di Fis. e Chim., Univ. Degli Studi di Palermo, Palermo, Italy
Abstract :
We present a scheme for the feature extraction and classification of the fluorescence staining patterns of HEp-2 cells in IIF images. We propose a set of complementary processes specific to each class of patterns to search. Our set of processes consists of preprocessing, features extraction and classification. The choice of methods, features and parameters was performed automatically, using the Mean Class Accuracy (MCA) as a figure of merit. We extract a large number (108) of features able to fully characterize the staining pattern of HEp-2 cells. We propose a classification approach based on two steps: the first step follows the one-against-all (OAA) scheme, while the second step follows the one-against-one (OAO) scheme. To do this, we needed to implement 21 KNN classifiers: 6 OAA and 15 OAO. Leave-one-out image cross validation method was used for the evaluation of the results.
Keywords :
cellular biophysics; feature extraction; fluorescence; image classification; medical image processing; HEp-2 cell classification; IIF images; KNN classifier; MCA; OAA; OAO; complementary processes; feature classification; feature extraction; fluorescence staining patterns; heterogeneous class processes; indirect immunofluorescence slides; k-nearest neighbours; leave-one-out image cross validation method; mean class accuracy; one-against-all scheme; one-against-one scheme; Accuracy; Biomedical imaging; Feature extraction; Pattern recognition; Pipelines; Standards; Training; IIF images; KNearest-Neighbors (K-NN); classification; leave-one out cross validation; multi-class; one-against-all classification;
Conference_Titel :
Pattern Recognition Techniques for Indirect Immunofluorescence Images (I3A), 2014 1st Workshop on
Conference_Location :
Stockholm
DOI :
10.1109/I3A.2014.17