DocumentCode :
1760563
Title :
Uniformization Method for Solving Cardiac Electrophysiology Models Based on the Markov-Chain Formulation
Author :
Moreira Gomes, Johnny ; Alvarenga, Adriele ; Silva Campos, Ricardo ; Rocha, Bernardo Martins ; Couto da Silva, Ana Paula ; Weber dos Santos, Rodrigo
Author_Institution :
Dept. of Comput. Sci., Fed. Univ. of Juiz de Fora, Juiz de Fora, Brazil
Volume :
62
Issue :
2
fYear :
2015
fDate :
Feb. 2015
Firstpage :
600
Lastpage :
608
Abstract :
This paper compares different numerical methods for the solution of myocyte models of cardiac electrophysiology. In particular, it presents how the technique called uniformization method substantially increases the stability of simple first-order methods such as Euler explicit method and Rush-Larsen (RL) method, for the solution of modern electrophysiology models that are based on continuous-time Markov chains (MCs) for the description of subcellular structures, such as ion channels. The MCs are often associated with stiff ordinary differential equations that severely limit the time step used by these traditional methods. By using the uniformization method, we could significantly increase the time steps for the solution of different cardiac electrophysiology models and improve the computational performance up to 150 times compared to the performance of Euler´s and RL´s methods.
Keywords :
Markov processes; bioelectric phenomena; biomembrane transport; differential equations; electrocardiography; Euler explicit method; Rush-Larsen method; cardiac electrophysiology models; computational performance; continuous-time Markov chain formulation; ion channels; myocyte models; numerical methods; simple first-order methods; stiff ordinary differential equations; subcellular structures; uniformization method; Biological system modeling; Computational modeling; Differential equations; Equations; Markov processes; Mathematical model; Numerical models; Cardiac Electrophysiology; Cardiac electrophysiology; Computational Modeling; Computational Physiology; Markov Chains; Markov chains (MCs); Numerical Methods; computational modeling; computational physiology; numerical methods;
fLanguage :
English
Journal_Title :
Biomedical Engineering, IEEE Transactions on
Publisher :
ieee
ISSN :
0018-9294
Type :
jour
DOI :
10.1109/TBME.2014.2361325
Filename :
6915848
Link To Document :
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