• DocumentCode
    1762832
  • Title

    Hippocampal Shape Modeling Based on a Progressive Template Surface Deformation and its Verification

  • Author

    Jaeil Kim ; Valdes-Hernandez, Maria Del C. ; Royle, Natalie A. ; Jinah Park

  • Author_Institution
    Dept. of Comput. Sci., Korea Adv. Inst. of Sci. & Technol. (KAIST), Daejeon, South Korea
  • Volume
    34
  • Issue
    6
  • fYear
    2015
  • fDate
    42156
  • Firstpage
    1242
  • Lastpage
    1261
  • Abstract
    Accurately recovering the hippocampal shapes against rough and noisy segmentations is as challenging as achieving good anatomical correspondence between the individual shapes. To address these issues, we propose a mesh-to-volume registration approach, characterized by a progressive model deformation. Our model implements flexible weighting scheme for model rigidity under a multi-level neighborhood for vertex connectivity. This method induces a large-to-small scale deformation of a template surface to build the pairwise correspondence by minimizing geometric distortion while robustly restoring the individuals´ shape characteristics. We evaluated the proposed method´s 1) accuracy and robustness in smooth surface reconstruction, 2) sensitivity in detecting significant shape differences between healthy control and disease groups (mild cognitive impairment and Alzheimer´s disease), 3) robustness in constructing the anatomical correspondence between individual shape models, and 4) applicability in identifying subtle shape changes in relation to cognitive abilities in a healthy population. We compared the performance of the proposed method with other well-known methods-SPHARM-PDM, ShapeWorks and LDDMM volume registration with template injection-using various metrics of shape similarity, surface roughness, volume, and shape deformity. The experimental results showed that the proposed method generated smooth surfaces with less volume differences and better shape similarity to input volumes than others. The statistical analyses with clinical variables also showed that it was sensitive in detecting subtle shape changes of hippocampus.
  • Keywords
    biomedical MRI; brain; cognition; deformation; diseases; image registration; image segmentation; medical image processing; physiological models; shear modulus; statistical analysis; surface roughness; Alzheimer´s disease; LDDMM volume registration; SPHARM-PDM; ShapeWorks; anatomical correspondence; clinical variables; cognitive abilities; flexible weighting scheme; geometric distortion; hippocampal shape modeling; individual shape characteristics; individual shape models; large-to-small scale deformation; mesh-to-volume registration; mild cognitive impairment; model rigidity; multilevel neighborhood; noisy segmentations; pairwise correspondence; progressive model deformation; progressive template surface deformation; rough segmentations; shape deformity; shape similarity; smooth surface reconstruction; statistical analyses; subtle shape changes; surface roughness; template injection; vertex connectivity; Deformable models; Diseases; Laplace equations; Robustness; Rough surfaces; Shape; Surface roughness; Brain; hippocampus; magnetic resonance imaging (MRI); progressive model deformation; shape analysis;
  • fLanguage
    English
  • Journal_Title
    Medical Imaging, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0278-0062
  • Type

    jour

  • DOI
    10.1109/TMI.2014.2382581
  • Filename
    6990617