Title :
3D shape analysis using overcomplete spherical wavelets: Application to BLEB detection in cell biology
Author :
Tournemenne, Robin ; Ducroz, Christel ; Olivo-Marin, Jean-Christophe ; Dufour, Alexandre
Author_Institution :
Quantitative Image Anal. Unit, Inst. Pasteur, Paris, France
fDate :
April 29 2014-May 2 2014
Abstract :
Amoeboid cell motility is characterised by the emission of protrusions at the cellular surface (also known as “blebs”). Detection and counting of these protrusions is a crucial step towards the understanding of the deformation and motility machinery. We propose an automated technique to detect protrusions at the surface of cells observed in 3D fluorescence microscopy using over-complete spherical wavelets. The framework permits intuitive manipulation of wavelets on the sphere, thanks to a straightforward analogy with traditional wavelets on the plane. We illustrate detection results on a real data set of protruding cells, indicating the reliability of the method. Moreover, the flexibility of the approach makes it easily amenable to other shape analysis problems.
Keywords :
biological techniques; biomechanics; cell motility; cellular biophysics; fluorescence; optical microscopy; wavelet transforms; 3D fluorescence microscopy; 3D shape analysis; BLEB detection; amoeboid cell motility; cell biology; cell deformation; cell motility machinery; cellular surface; overcomplete spherical wavelet; protrusion emission; Biology; Shape; Surface reconstruction; Surface treatment; Surface waves; Three-dimensional displays; Wavelet analysis; 3D microscopy; Cell deformation; Cell morphology; Shape analysis; Spherical wavelets;
Conference_Titel :
Biomedical Imaging (ISBI), 2014 IEEE 11th International Symposium on
Conference_Location :
Beijing
DOI :
10.1109/ISBI.2014.6867884