DocumentCode :
1785001
Title :
Time scale analysis of receptor enzyme activity: Irreversible inhibition sometimes exhibits incubation-time independence
Author :
Tao You ; Hong Yue
Author_Institution :
Comput. Biol., Discovery Sci., Innovative Medicines & Early Dev., AstraZeneca, Macclesfield, UK
fYear :
2014
fDate :
2-5 Nov. 2014
Firstpage :
38
Lastpage :
43
Abstract :
At early drug discovery, purified protein-based assays are often used to characterise compound potency. As far as dose response is concerned, it is often thought that a time-independent inhibitor is reversible and a time-dependent inhibitor is irreversible. Using a simple kinetics model, we investigate the legitimacy of this. Our model-based analytical analysis and numerical studies reveal that dose response of an irreversible inhibitor may appear time-independent under certain parametric conditions. Hence, time-independence cannot be used as evidence for inhibitor reversibility. Furthermore, we also analysed how the synthesis and degradation of a target receptor affect drug inhibition in an in vitro cell-based assay setting. Indeed, these processes may also influence dose response of an irreversible inhibitor in such a way that it appears time-independent under certain conditions. Hence, time-independent dose response in a cell assay also needs careful considerations. It is necessary to formulate a suitable model for analysis of protein-based assay and in vitro cell assay data to ensure a consistent understanding.
Keywords :
biochemistry; cellular biophysics; drugs; enzymes; molecular biophysics; numerical analysis; proteins; purification; drug discovery; drug inhibition; in vitro cell-based assay; irreversible time-dependent inhibitor; kinetic model; model-based analytical analysis; numerical analysis; purified protein-based assays; receptor enzyme activity; reversible time-independent inhibitor; time scale analysis; time-independent dose response; Approximation methods; Degradation; Drugs; In vitro; Inhibitors; Numerical models; Proteins; fast drug process; irreversible inhibition; model of receptor turnover; slow drug process; time-scale analysis;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Bioinformatics and Biomedicine (BIBM), 2014 IEEE International Conference on
Conference_Location :
Belfast
Type :
conf
DOI :
10.1109/BIBM.2014.6999257
Filename :
6999257
Link To Document :
بازگشت