Title :
Based on bioinformatics approach to explore the novel targets and activity of multiple ingredients in Shuang-Huang-Lian (Using bioinformatics approach to explore the machanisms of a modern formula)
Author :
Gu Hao ; Li Jian ; Zhang Qi ; Li Qiang ; Jiang Miao ; Lu Ai-ping ; Cai Cheng-ke ; Wang Yun
Author_Institution :
Sch. of Chinese Mater. Medica, Beijing Univ. of Chinese Med., Beijing, China
Abstract :
Shuang-Huang-Lian (SHL) is a famous modern formula prepared from three medicinal herbs including Flos Lonicerae, Radix Scutellariae and Fructus Forsythiae. Currently, SHL has been developed a variety of dosage forms due to its proved clinical efficacy. However, the in-depth research on targets and pharmacological mechanisms of SHL preparations was scarce. In the presented study, the bioinformatics approaches were adopted to integrate relevant data and biological information. As a result, a PPI network was built and the common topological parameters were characterized. The reuslts suggested that the PPI network of SHL exhibited a scale-free property and modular architecture. The drug target network of SHL was structured with 21 functional clusters as modules naturally. According to certain modules and pharmacological effects distribution, an anti-tumor effect and protented durg targets were predicted. In conclutions, a bioinformatics approach was established for exploring the drug targets and pharmacological activity distribution. The results offered a novel anti-tumor effect of SHL and provide a clue for further research and development.
Keywords :
biochemistry; bioinformatics; data analysis; data integration; data mining; drugs; feature extraction; medical computing; molecular biophysics; molecular configurations; proteins; topology; tumours; Flos Lonicerae; Fructus Forsythiae; PPI network modular architecture; PPI network scale-free property; Radix Scutellariae; SHL development; SHL dosage form; SHL formula preparation; SHL functional cluster; SHL preparation; SHL research; Shuang-Huang-Lian formula; antitumor effect; bioinformatics approach; biological information integration; clinical efficacy; drug activity exploration; drug target exploration; drug target network; durg target prediction; medicinal herb; modern formula mechanism; multiple SHL ingredient; pharmacological activity distribution; pharmacological effect distribution; pharmacological mechanism; relevant data integration; topological parameter characterization; Bioinformatics; Databases; Diseases; Drugs; Educational institutions; Proteins; PPI network; Shuang-Huang-Lian; drug target network;
Conference_Titel :
Bioinformatics and Biomedicine (BIBM), 2014 IEEE International Conference on
Conference_Location :
Belfast
DOI :
10.1109/BIBM.2014.6999318