DocumentCode :
1787502
Title :
A Grid-Enabled Virtual Screening Gateway
Author :
Jaghoori, Mohammad Mahdi ; Van Altena, Allard J. ; Bleijlevens, Boris ; Olabarriaga, Silvia D.
Author_Institution :
Acad. Med. Center, Univ. of Amsterdam, Amsterdam, Netherlands
fYear :
2014
fDate :
3-5 June 2014
Firstpage :
24
Lastpage :
29
Abstract :
In computer-aided drug design, software tools are used to narrow down possible drug candidates, therefore reducing the amount of expensive in vitro research by a process called virtual screening. However, searching for drug candidates among a huge number of alternatives requires extensive computation. In this paper, we describe a science gateway for virtual screening that has been tailored to the specific needs of our local users. By reusing the generic architecture and code of a previously developed science gateway for another scientific discipline, it took us only two months from early requirements analysis to obtain a running gateway. The early empirical results show (1) considerable speed-ups, thanks to usage of grid infrastructure, and, (2) user satisfaction, thanks to the user-centred design of the web interface and automated data management.
Keywords :
Internet; grid computing; medical computing; software tools; user centred design; virtual reality; Web interface; automated data management; computer-aided drug design; drug candidates; drug discovery research; grid infrastructure usage; grid-enabled virtual screening gateway; science gateway; software tools; user satisfaction; user-centred design; Computer architecture; Drugs; Libraries; Logic gates; Portals; Software; User interfaces;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Science Gateways (IWSG), 2014 6th International Workshop on
Conference_Location :
Dublin
Type :
conf
DOI :
10.1109/IWSG.2014.11
Filename :
6882064
Link To Document :
بازگشت