DocumentCode :
1789749
Title :
Apply support vector regression to extract the potential susceptibility genes of chronic obstructive pulmonary disease
Author :
Lin Hua ; Hong Xia ; Ping Zhou ; Li An
Author_Institution :
Sch. of Biomed. Eng., Capital Med. Univ., Beijing, China
fYear :
2014
fDate :
14-16 Oct. 2014
Firstpage :
787
Lastpage :
791
Abstract :
Chronic obstructive pulmonary disease (COPD) is a complex disorder classified as the 3rd cause of the death worldwide. So far, we know that this disease is progressive and can not be cured. In recent years, although some genes have been reported to be associated with COPD, the overlapped genetic associations can´t be replicated. Therefore, it is difficult to synthesize and interpret these different findings. To address this issue, we conducted an integrated data analysis by combining network topological properties with support vector regression (SVR) to extract the potential susceptibility genes of COPD. As a result, COPD-related risk genes such as BBS9, ADAM19 and TGFB1 were identified, and these genes were supported by some previous and recent evidences. Our approach can help improve the accuracy in identifying COPD-related risk genes.
Keywords :
data analysis; diseases; genetics; medical disorders; regression analysis; support vector machines; ADAM19; BBS9; COPD-related risk genes; SVR; TGFB1; chronic obstructive pulmonary disease; integrated data analysis; network topological properties; overlapped genetic associations; potential susceptibility genes; support vector regression; Correlation; Data mining; Diseases; Feature extraction; Genetics; Kernel; Support vector machines; chronic obstructive pulmonary disease; network; support vector regression; susceptibility genes;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Biomedical Engineering and Informatics (BMEI), 2014 7th International Conference on
Conference_Location :
Dalian
Print_ISBN :
978-1-4799-5837-5
Type :
conf
DOI :
10.1109/BMEI.2014.7002879
Filename :
7002879
Link To Document :
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