DocumentCode
1792213
Title
Research on preprocessing of DNase signal in DNAprotein binding sites detection
Author
Deyuan Lian ; Bo He ; Fengfei Song ; Meng Li ; Weixing Feng
Author_Institution
Coll. of Autom., Harbin Eng. Univ., Harbin, China
fYear
2014
fDate
3-6 Aug. 2014
Firstpage
1619
Lastpage
1623
Abstract
There are many functional proteins in human cells, which bind in genes and regulate their expression. Accurately identifying binding sites of these proteins is an important and difficult job in life science. To solve this problem, a new DNA protein binding site detection technology, named DNase-Seq emerges. DNase-Seq has great advantages, but its detection signal is quite complex, which makes accurately identifying DNA protein binding site a challenging task. We in-depth analyze DNase-Seq signals and propose a novel preprocessing method. The corresponding experiment proves validity of the method.
Keywords
DNA; cellular biophysics; molecular biophysics; proteins; DNA-protein binding sites detection; DNase signal preprocessing; DNase-Seq; gene expression; human cells; Bioinformatics; DNA; Educational institutions; Genomics; In vivo; Proteins; Sequential analysis; DNA; DNase-Seq; binding sites; functional protein;
fLanguage
English
Publisher
ieee
Conference_Titel
Mechatronics and Automation (ICMA), 2014 IEEE International Conference on
Conference_Location
Tianjin
Print_ISBN
978-1-4799-3978-7
Type
conf
DOI
10.1109/ICMA.2014.6885942
Filename
6885942
Link To Document