• DocumentCode
    1792213
  • Title

    Research on preprocessing of DNase signal in DNAprotein binding sites detection

  • Author

    Deyuan Lian ; Bo He ; Fengfei Song ; Meng Li ; Weixing Feng

  • Author_Institution
    Coll. of Autom., Harbin Eng. Univ., Harbin, China
  • fYear
    2014
  • fDate
    3-6 Aug. 2014
  • Firstpage
    1619
  • Lastpage
    1623
  • Abstract
    There are many functional proteins in human cells, which bind in genes and regulate their expression. Accurately identifying binding sites of these proteins is an important and difficult job in life science. To solve this problem, a new DNA protein binding site detection technology, named DNase-Seq emerges. DNase-Seq has great advantages, but its detection signal is quite complex, which makes accurately identifying DNA protein binding site a challenging task. We in-depth analyze DNase-Seq signals and propose a novel preprocessing method. The corresponding experiment proves validity of the method.
  • Keywords
    DNA; cellular biophysics; molecular biophysics; proteins; DNA-protein binding sites detection; DNase signal preprocessing; DNase-Seq; gene expression; human cells; Bioinformatics; DNA; Educational institutions; Genomics; In vivo; Proteins; Sequential analysis; DNA; DNase-Seq; binding sites; functional protein;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Mechatronics and Automation (ICMA), 2014 IEEE International Conference on
  • Conference_Location
    Tianjin
  • Print_ISBN
    978-1-4799-3978-7
  • Type

    conf

  • DOI
    10.1109/ICMA.2014.6885942
  • Filename
    6885942