DocumentCode
1800231
Title
Regulating oscillation dynamics of a synthetic genetic circuit through positive feedback
Author
Wang Junwei ; Chen Aimin
Author_Institution
Cisco Sch. of Inf., Guangdong Univ. of Foreign Studies, Guangzhou, China
fYear
2013
fDate
26-28 July 2013
Firstpage
8216
Lastpage
8220
Abstract
In cellular systems, sustained oscillations of mRNAs and proteins can be generated by negative feedback mechanism. However, the negative feedback is often accompanied by the positive feedback, raising the intriguing question of what the extra function the positive feedback imparts. In this work, we investigate how the positive feedback affect the systems-level oscillation dynamics (e.g., frequency, amplitude and robustness) of a synthetic repressilator circuit. We show numerically that the original repressilator can produce oscillations with a tunable frequency and near-constant amplitude. But adding a self-positive feedback loop to the repressilator is found to simultaneously weaken its frequency´s tunability and amplitude. Moreover, this positive feedback reduces robustness of the repressilator to environmental perturbations. Combining with previous results on the negative-plus-positive feedback design principle, our findings indicate that the positive feedback may play different functions in different network structures of the cellular circuits.
Keywords
RNA; biology; cellular biophysics; feedback; genetics; proteins; cellular systems; mRNAs; near-constant amplitude; negative feedback mechanism; negative-plus-positive feedback design principle; oscillation dynamics regulation; positive feedback; self-positive feedback loop; synthetic genetic circuit; synthetic repressilator circuit; systems-level oscillation dynamics; tunable frequency; Bifurcation; Genetics; Negative feedback; Oscillators; Proteins; Robustness; Amplitude/Frequency Curve; Repressilator; Robustness; Synthetic Genetic Circuit; Tunability;
fLanguage
English
Publisher
ieee
Conference_Titel
Control Conference (CCC), 2013 32nd Chinese
Conference_Location
Xi´an
Type
conf
Filename
6640890
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