• DocumentCode
    1807370
  • Title

    Development and Implementation of the PSI MI Standard for Molecular Interaction

  • Author

    Kerrien, Samuel ; Hermjakob, Henning

  • Author_Institution
    Eur. Bioinformatics Inst., EMBL Outstation, Cambridge
  • fYear
    2006
  • fDate
    3-6 Dec. 2006
  • Firstpage
    1587
  • Lastpage
    1594
  • Abstract
    The pool of molecular interaction data is growing fast but nevertheless remains fragmented. Combining together data coming from heterogeneous sources is a crucial step towards a deeper understanding of the cell machinery. The Proteomics Standard Initiative offers mature standards (PSI-MI) to facilitate the exchange and analysis of molecular interaction data. After introducing the details of the latest version of the PSI-MI data model, we will present the implementation of PSI-MI in the IntAct project, which offers a platform for management and analysis of interaction data. Finally we will give some insight into realistically using molecular interaction data as a foundation for other research
  • Keywords
    biology computing; cellular biophysics; molecular biophysics; proteins; IntAct project; PSI MI standard; Proteomics Standard Initiative; cell machinery; molecular interaction data; Bioinformatics; Data models; Genomics; Machinery; Ontologies; Project management; Proteomics; Standards development; Standards publication; XML;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Simulation Conference, 2006. WSC 06. Proceedings of the Winter
  • Conference_Location
    Monterey, CA
  • Print_ISBN
    1-4244-0500-9
  • Electronic_ISBN
    1-4244-0501-7
  • Type

    conf

  • DOI
    10.1109/WSC.2006.322931
  • Filename
    4117789