• DocumentCode
    1809208
  • Title

    Signal extraction from movies of honeybee brain activity by convex analysis.

  • Author

    Strauch, Martin ; Rein, Julia ; Galizia, C. Giovanni

  • Author_Institution
    Bioinf. & Inf. Min., Univ. of Konstanz, Konstanz, Germany
  • fYear
    2012
  • fDate
    23-25 Feb. 2012
  • Firstpage
    1
  • Lastpage
    6
  • Abstract
    Calcium-imaging enables us to record movies of brain activity from the antennal lobe, a region of the honeybee brain responsible for processing odor information. Here, we present a matrix factorisation framework to automatically detect the neural units in this region and to accurately estimate their signals. Based on a non-negative mixture model, the algorithmic approach is to construct a convex cone that contains the data. The generating vectors of the cone are the purest, least mixed timeseries from the movie and serve as basis vectors for the matrix factorisation. We show that vectors selected in this way correspond to the biological signals and evaluate the method on both artificial and biological data.
  • Keywords
    brain; matrix decomposition; neurophysiology; signal processing; zoology; algorithmic approach; antennal lobe; artificial data; biological data; biological signal; calcium-imaging; convex analysis; convex cone; honeybee brain activity; matrix factorisation framework; neural units; nonnegative mixture model; odor information; signal extraction; Brain; Correlation; Motion pictures; Noise; Principal component analysis; Vectors; imaging; matrix factorisation; non-negativity;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computational Advances in Bio and Medical Sciences (ICCABS), 2012 IEEE 2nd International Conference on
  • Conference_Location
    Las Vegas, NV
  • Print_ISBN
    978-1-4673-1320-9
  • Electronic_ISBN
    978-1-4673-1319-3
  • Type

    conf

  • DOI
    10.1109/ICCABS.2012.6182646
  • Filename
    6182646