Title :
State estimation for a model of gene expression
Author :
Lillacci, Gabriele ; Valigi, Paolo
Author_Institution :
Dipt. di Ing. Elettron. e dell´´Inf., Univ. degli Studi di Perugia, Perugia
Abstract :
In this paper we study the state estimation problem for a basic model of gene expression. The model describes the interaction between mRNA and protein(s) within the transcription- translation process. We first study some basic dynamic properties of the model, namely the existence of a unique equilibrium point, its stability and local observability. Then, we address the problem of estimating mRNA concentration by only measuring total protein concentration, and we propose a solution to it by means of different state estimation schemes. Finally, by means of in silico experiments, we compare the performance of the proposed structures.
Keywords :
biology; macromolecules; proteins; state estimation; gene expression model; mRNA; protein concentration; state estimation; transcription-translation process; Biological system modeling; Context modeling; Gene expression; Noise measurement; Observability; Observers; Proteins; Stability; State estimation; Time measurement;
Conference_Titel :
Circuits and Systems, 2008. ISCAS 2008. IEEE International Symposium on
Conference_Location :
Seattle, WA
Print_ISBN :
978-1-4244-1683-7
Electronic_ISBN :
978-1-4244-1684-4
DOI :
10.1109/ISCAS.2008.4541850