Title :
DNA Sequences Optimization Based on Gravitational Search Algorithm for Reliable DNA Computing
Author :
Xiao, Jianhua ; Cheng, Zhen
Author_Institution :
Res. Center of Logistics, Nankai Univ., Tianjin, China
Abstract :
In DNA computing, the design of DNA sequences is one of the most important practical and important research topics. Since DNA sequence design need meet simultaneously several physical, chemical and logical constraints, it is difficult to be solved by the traditional optimization methods. In this paper, the gravitational search algorithm is implemented to solve the DNA sequence design problem. The results of simulation experiments show that the improved algorithm is valid and outperforms other evolutionary algorithms.
Keywords :
biology; evolutionary computation; search problems; DNA sequences optimization; chemical constraints; evolutionary algorithms; gravitational search algorithm; logical constraints; physical constraints; reliable DNA computing; Algorithm design and analysis; DNA; DNA computing; Encoding; Optimization; Search problems; Thermodynamics; DNA computing; DNA sequences design; Gravitational search algorithm;
Conference_Titel :
Bio-Inspired Computing: Theories and Applications (BIC-TA), 2011 Sixth International Conference on
Conference_Location :
Penang
Print_ISBN :
978-1-4577-1092-6
DOI :
10.1109/BIC-TA.2011.12