DocumentCode
1855005
Title
A multi-function, microfluidic module for mutation detection
Author
Lee, Tae Yoon ; Han, Kyudong ; Park, Daniel S. ; Soper, Steven S. ; Batzer, Mark A. ; Nikitopoulos, Dimitris E. ; Murphy, Michael C.
Author_Institution
Center for BioModular Multi-Scale Syst., Louisiana State Univ., Baton Rouge, LA, USA
fYear
2009
fDate
21-25 June 2009
Firstpage
120
Lastpage
123
Abstract
A multi-function, microfluidic module was designed, fabricated, and used for mutation detection using the ligase detection reaction (LDR) following amplification by the polymerase chain reaction (PCR). The module carried out four processing steps: (1) the PCR to amplify a target region in the K-ras gene of the human genome, which can lead to colorectal cancer; (2) the purification of the PCR products; (3) the mixing of the purified PCR products with an LDR reagent using a passive micromixer; and (4) the LDR to make florescent oligonucleotide products detectable by gel electrophoresis. Single nucleotide polymorphisms in the K-ras gene were detected from a concentration ratio of mutant to normal genomic DNA of 1:40 using the multi-function, microfluidic module.
Keywords
bioMEMS; cancer; electrophoresis; genomics; microfluidics; mixing; molecular biophysics; molecular configurations; LDR reagent; PCR product purification; colorectal cancer; florescent oligonucleotide products; gel electrophoresis; human genome K-ras gene; ligase detection reaction; microfluidic module design; microfluidic module fabrication; multifunction microfluidic module; mutation detection; passive micromixer; polymerase chain reaction amplification; purified PCR product mixing; single nucleotide polymorphism; Bioinformatics; Cancer detection; DNA; Electrokinetics; Genetic mutations; Genomics; Humans; Microfluidics; Polymers; Purification; LDR; Ligase Detection Reaction; Microfluidics; Module; Mutation detection; PCR; Polymerase Chain Reaction;
fLanguage
English
Publisher
ieee
Conference_Titel
Solid-State Sensors, Actuators and Microsystems Conference, 2009. TRANSDUCERS 2009. International
Conference_Location
Denver, CO
Print_ISBN
978-1-4244-4190-7
Electronic_ISBN
978-1-4244-4193-8
Type
conf
DOI
10.1109/SENSOR.2009.5285548
Filename
5285548
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