• DocumentCode
    1855005
  • Title

    A multi-function, microfluidic module for mutation detection

  • Author

    Lee, Tae Yoon ; Han, Kyudong ; Park, Daniel S. ; Soper, Steven S. ; Batzer, Mark A. ; Nikitopoulos, Dimitris E. ; Murphy, Michael C.

  • Author_Institution
    Center for BioModular Multi-Scale Syst., Louisiana State Univ., Baton Rouge, LA, USA
  • fYear
    2009
  • fDate
    21-25 June 2009
  • Firstpage
    120
  • Lastpage
    123
  • Abstract
    A multi-function, microfluidic module was designed, fabricated, and used for mutation detection using the ligase detection reaction (LDR) following amplification by the polymerase chain reaction (PCR). The module carried out four processing steps: (1) the PCR to amplify a target region in the K-ras gene of the human genome, which can lead to colorectal cancer; (2) the purification of the PCR products; (3) the mixing of the purified PCR products with an LDR reagent using a passive micromixer; and (4) the LDR to make florescent oligonucleotide products detectable by gel electrophoresis. Single nucleotide polymorphisms in the K-ras gene were detected from a concentration ratio of mutant to normal genomic DNA of 1:40 using the multi-function, microfluidic module.
  • Keywords
    bioMEMS; cancer; electrophoresis; genomics; microfluidics; mixing; molecular biophysics; molecular configurations; LDR reagent; PCR product purification; colorectal cancer; florescent oligonucleotide products; gel electrophoresis; human genome K-ras gene; ligase detection reaction; microfluidic module design; microfluidic module fabrication; multifunction microfluidic module; mutation detection; passive micromixer; polymerase chain reaction amplification; purified PCR product mixing; single nucleotide polymorphism; Bioinformatics; Cancer detection; DNA; Electrokinetics; Genetic mutations; Genomics; Humans; Microfluidics; Polymers; Purification; LDR; Ligase Detection Reaction; Microfluidics; Module; Mutation detection; PCR; Polymerase Chain Reaction;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Solid-State Sensors, Actuators and Microsystems Conference, 2009. TRANSDUCERS 2009. International
  • Conference_Location
    Denver, CO
  • Print_ISBN
    978-1-4244-4190-7
  • Electronic_ISBN
    978-1-4244-4193-8
  • Type

    conf

  • DOI
    10.1109/SENSOR.2009.5285548
  • Filename
    5285548