DocumentCode :
1900661
Title :
Detection of Pathogenic Mutation Prone Locations from Protein Sequences using Solvent Accessibility Measurements
Author :
Ahdesmäki, Miika ; Thusberg, Janita ; Huttunen, Heikki ; Vihinen, Mauno ; Yli-Harja, Olli
Author_Institution :
Tampere Univ. of Technol., Tampere
fYear :
2007
fDate :
10-12 June 2007
Firstpage :
1
Lastpage :
4
Abstract :
This paper presents a simple way of predicting locations in protein sequences that are prone to disease-causing mutations. These locations are found with the help of outlier analysis of recurrence quantification analysis (RQA) applied to protein solvent accessibility measurements. The detected locations are related to the deterministic patterns of the protein sequences. These deterministic patterns may be related to binding and folding and thus changes in these locations can cause disease by altering the structural and/or functional properties of the protein.
Keywords :
diseases; genetic engineering; genetics; proteins; deterministic patterns; disease-causing mutations; functional properties; pathogenic mutation prone locations; protein sequences; protein solvent accessibility measurements; recurrence quantification analysis; solvent accessibility measurements; Amino acids; Diseases; Genetic mutations; Hospitals; Humans; Pathogens; Protein engineering; Robustness; Signal processing; Solvents;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Genomic Signal Processing and Statistics, 2007. GENSIPS 2007. IEEE International Workshop on
Conference_Location :
Tuusula
Print_ISBN :
978-1-4244-0998-3
Electronic_ISBN :
978-1-4244-0999-0
Type :
conf
DOI :
10.1109/GENSIPS.2007.4365845
Filename :
4365845
Link To Document :
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