Title :
Structural vs. functional mechanisms of duplicate gene loss following whole genome doubling
Author :
Sankoff, David ; Baoyong Wang ; Chunfang Zheng ; Fernando Buen Abad Najar, Carlos
Author_Institution :
Dept. of Math. & Stat., Univ. of Ottawa, Ottawa, ON, Canada
Abstract :
The process of whole genome doubling (WGD) gives rise to two copies of each chromosome in a genome, containing the same genes in the same order. Through an attrition mechanism known as fractionation, one of each pair of duplicate genes is lost over evolutionary time, resulting in an interleaving patterns of deletions from duplicated regions [1]. This differentiates the WGD/fractionation model from general approaches to gene duplication, pioneered by El-Mabrouk [2].
Keywords :
genetics; WGD/fractionation model; attrition mechanism; chromosome; duplicate gene loss; duplicated regions; evolutionary time; functional mechanism; gene duplication; interleaving deletion patterns; structural mechanism; whole genome doubling; Bioinformatics; Biological cells; Biological system modeling; Fractionation; Genomics; Silicon;
Conference_Titel :
Computational Advances in Bio and Medical Sciences (ICCABS), 2014 IEEE 4th International Conference on
Conference_Location :
Miami, FL
Print_ISBN :
978-1-4799-5786-6
DOI :
10.1109/ICCABS.2014.6863915