• DocumentCode
    1910156
  • Title

    Towards querying bioinformatic linked data in natural language

  • Author

    Marginean, Anca ; Marc, Oana

  • Author_Institution
    Dept. of Comput. Sci., Tech. Univ. of Cluj-Napoca, Cluj-Napoca, Romania
  • fYear
    2013
  • fDate
    5-7 Sept. 2013
  • Firstpage
    23
  • Lastpage
    26
  • Abstract
    Even though Linked Data is a fairly young concept, querying its stores renews the old challenge of querying data in an easy and yet sufficiently expressive way. But, if in case of querying traditional relational databases, the knowledge of complete structure was feasible, in case of Linked Data it is far more difficult to have an exhaustive view. From the perspective of facilitating the access to the data to end-users with no prior expertise, the most natural solution would be querying in natural language. But, from the technological point of view, Natural Language Processing still has many limitations. In this context, we introduce our first results towards a system for building SPARQL queries from NL sentences that is based on sentences´ grammatical structure, general structural patterns and ontological descriptions. We focus on processing queries from pharmacology data of Bio2RDF project.
  • Keywords
    SQL; bioinformatics; natural language processing; query processing; Bio2RDF project; NL sentences; SPARQL queries; bioinformatic linked data querying; general structural patterns; natural language processing; ontological descriptions; pharmacology data; sentences grammatical structure; Bioinformatics; Buildings; Drugs; Natural languages; Ontologies; Semantics; Vocabulary;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Intelligent Computer Communication and Processing (ICCP), 2013 IEEE International Conference on
  • Conference_Location
    Cluj-Napoca
  • Print_ISBN
    978-1-4799-1493-7
  • Type

    conf

  • DOI
    10.1109/ICCP.2013.6646075
  • Filename
    6646075