DocumentCode :
191037
Title :
Poster: Context-sensitive use of bioinformatics tools with complementary functionalities for hypothesis generation
Author :
Abedi, Vida ; Yeasin, Mohammed ; Zand, Ramin
Author_Institution :
Dept. of Electr. & Comput. Eng., Univ. of Memphis, Memphis, TN, USA
fYear :
2014
fDate :
2-4 June 2014
Firstpage :
1
Lastpage :
2
Abstract :
Bioinformatics tools can be of great help in mining and summarizing voluminous data. However, such tools are usually ineffective in dealing with heterogeneous data and have a limited array of functionalities. Integrated Bioinformatics tools with complementary functionalities (IBTCF) can potentially further knowledge discovery. In this paper, we have used a progressive IBTCF that infer complementary information from the literature, high throughput genomic data and the human curated Gene Ontology classification. Empirical analyses were performed to find an associations between Alzheimer´s disease and Tuberculosis, two seemingly disconnected diseases. The origin for this association is believed to be through matrix metalloproteinases (MMP) genes and their mode of action. The integrated system may also further multi-faceted issues in knowledge discovery.
Keywords :
bioinformatics; data mining; diseases; genomics; Alzheimer´s disease; MMP genes; bioinformatics tools; complementary functionality; context sensitive use; high throughput genomic data; human curated Gene Ontology classification; hypothesis generation; matrix metalloproteinases; tuberculosis; voluminous data mining; voluminous data summarizing; Arrays; Bioinformatics; Diseases; Educational institutions; Genetics; Knowledge discovery; Ontologies; Bioinformatics; Hypothesis Generation; Knowledge Discovery; Literature-Mining; Ontology Mapping; Text-Mining; Tool Integration;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Computational Advances in Bio and Medical Sciences (ICCABS), 2014 IEEE 4th International Conference on
Conference_Location :
Miami, FL
Print_ISBN :
978-1-4799-5786-6
Type :
conf
DOI :
10.1109/ICCABS.2014.6863929
Filename :
6863929
Link To Document :
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