DocumentCode
1924099
Title
A novel approach to select significant genes of leukemia cancer data using K-Means clustering
Author
Palanisamy, P. ; Perumal ; Thangavel, K. ; Manavalan, R.
Author_Institution
Dept. of Biotechnol., Periyar Univ., Salem, India
fYear
2013
fDate
21-22 Feb. 2013
Firstpage
104
Lastpage
108
Abstract
DNA microarray technologies are leading to an explosion in available gene expression data which simultaneously monitor the expression pattern of thousands of genes. All the genes may not be biologically significant in diagnosing the disease. In this paper, a novel approach has been proposed to select significant genes of leukemia cancer using K-Means clustering algorithm. It is an unsupervised machine learning approach, which is being used to identify the unknown patterns from the huge amount of data. The proposed K-Means algorithm has been experimented to cluster the genes for K=5,10 and 15. The significant genes have been identified through the best accuracy obtained from the clusters generated. The accuracy of the clusters are determined again by using K-Means algorithm compared with ground truth values.
Keywords
biology computing; cancer; genetics; molecular biophysics; pattern classification; unsupervised learning; DNA microarray technology; K-means clustering; disease diagnosis; gene expression data; gene selection; ground truth value; leukemia cancer data; unsupervised machine learning approach; Accuracy; Cancer; Clustering algorithms; Data analysis; Diseases; Gene expression; Sensitivity; Accuracy; Clustering; K-Means; Leukemia; Microarray; Sensitivity; Specificity;
fLanguage
English
Publisher
ieee
Conference_Titel
Pattern Recognition, Informatics and Mobile Engineering (PRIME), 2013 International Conference on
Conference_Location
Salem
Print_ISBN
978-1-4673-5843-9
Type
conf
DOI
10.1109/ICPRIME.2013.6496455
Filename
6496455
Link To Document