• DocumentCode
    1951138
  • Title

    Discriminating proteins using a novel ensemble algorithm

  • Author

    Nikookar, Elham ; Badie, Kambiz ; Sadeghi, Mohammadreza

  • Author_Institution
    Dept. of Algorithm & Computaion, Univ. of Tehran, Tehran, Iran
  • fYear
    2012
  • fDate
    17-19 Dec. 2012
  • Firstpage
    215
  • Lastpage
    219
  • Abstract
    Decisions of multiple hypotheses are combined in ensemble learning to produce more accurate and less risky results. In this article, we present a novel ensemble machine learning approach for the development of robust thermo stable protein discrimination. But unlike widely used ensemble approaches in which bootstrapped training data are used, we keep the original data unchanged. Instead, we build an ensemble of base classifiers that each of them uses a division of features (called feature group) to predict the class label of each sample. Then, we try to learn the base classifiers´ outputs (behavior) for different samples. By testing the proposed method on a well-known dataset, we show that our ensemble method is comparable in precision, recall and f-measure to the state of the art classifiers.
  • Keywords
    bioinformatics; learning (artificial intelligence); molecular biophysics; pattern classification; proteins; base classifiers; bootstrapped training data; dataset; ensemble algorithm; ensemble machine learning approach; robust thermo stable protein discrimination; Base classifier; Bioinformatics; Ensemble; Learning; Protein Discrimination;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Engineering and Sciences (IECBES), 2012 IEEE EMBS Conference on
  • Conference_Location
    Langkawi
  • Print_ISBN
    978-1-4673-1664-4
  • Type

    conf

  • DOI
    10.1109/IECBES.2012.6498129
  • Filename
    6498129