• DocumentCode
    1991338
  • Title

    Ensemble of Kernel Based Classifiers to Improve the Human Cancer Prediction using DNA Microarrays

  • Author

    Blanco, Ángela ; Martín-Merino, Manuel ; De Las Rivas, J.

  • Author_Institution
    Univ. Pontificia de Salamanca, Salamanca
  • fYear
    2007
  • fDate
    14-17 Oct. 2007
  • Firstpage
    1011
  • Lastpage
    1018
  • Abstract
    DNA microarrays provide rich profiles that are used in cancer prediction considering the gene expression levels across a collection of samples. Support Vector Machines (SVM), have been applied to the classification of cancer samples with encouraging results. However, they are usually based on Euclidean distances that fail to reflect accurately the sample proximities. Besides, SVM classifiers based on non-Euclidean dissimilarities fail to reduce significantly the errors. In this paper, we propose an ensemble of SVM classifiers in order to reduce the misclassification errors. The diversity among classifiers is induced considering a set of complementary dissimilarities and kernels. The experimental results suggest that that our algorithm improves classifiers based on a single dissimilarity and a combination strategy such as Bagging.
  • Keywords
    DNA; cancer; genetics; medical diagnostic computing; molecular biophysics; support vector machines; Bagging; DNA microarrays; Euclidean distances; gene expression; human cancer prediction; kernel based classifiers; support vector machines; Bagging; Cancer; DNA; Diversity reception; Gene expression; Humans; Kernel; Sampling methods; Support vector machine classification; Support vector machines;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
  • Conference_Location
    Boston, MA
  • Print_ISBN
    978-1-4244-1509-0
  • Type

    conf

  • DOI
    10.1109/BIBE.2007.4375681
  • Filename
    4375681