DocumentCode
1991338
Title
Ensemble of Kernel Based Classifiers to Improve the Human Cancer Prediction using DNA Microarrays
Author
Blanco, Ángela ; Martín-Merino, Manuel ; De Las Rivas, J.
Author_Institution
Univ. Pontificia de Salamanca, Salamanca
fYear
2007
fDate
14-17 Oct. 2007
Firstpage
1011
Lastpage
1018
Abstract
DNA microarrays provide rich profiles that are used in cancer prediction considering the gene expression levels across a collection of samples. Support Vector Machines (SVM), have been applied to the classification of cancer samples with encouraging results. However, they are usually based on Euclidean distances that fail to reflect accurately the sample proximities. Besides, SVM classifiers based on non-Euclidean dissimilarities fail to reduce significantly the errors. In this paper, we propose an ensemble of SVM classifiers in order to reduce the misclassification errors. The diversity among classifiers is induced considering a set of complementary dissimilarities and kernels. The experimental results suggest that that our algorithm improves classifiers based on a single dissimilarity and a combination strategy such as Bagging.
Keywords
DNA; cancer; genetics; medical diagnostic computing; molecular biophysics; support vector machines; Bagging; DNA microarrays; Euclidean distances; gene expression; human cancer prediction; kernel based classifiers; support vector machines; Bagging; Cancer; DNA; Diversity reception; Gene expression; Humans; Kernel; Sampling methods; Support vector machine classification; Support vector machines;
fLanguage
English
Publisher
ieee
Conference_Titel
Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on
Conference_Location
Boston, MA
Print_ISBN
978-1-4244-1509-0
Type
conf
DOI
10.1109/BIBE.2007.4375681
Filename
4375681
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