Title :
Typing of Polymorphic Human Genes by Picosecond-Resolved Förster Energy Transfer
Author :
Andreoni, Alessandra ; Bondani, Maria ; Lamperti, Marco ; Nardo, Luca
Author_Institution :
Dept. of Sci. & High Technol., Univ. of Insubria, Como, Italy
Abstract :
By analyzing, on a picoseconds time scale, the fluorescence decay of a donor undergoing Förster resonance energy transfer in a suitable donor-acceptor system we can reveal DNA sequences that are specific of genetically correlated diseases. Since we use picosecond excitation from a continuous-wave mode-locked laser and time-correlated single-photon detection, we achieve such a high acquisition rate, sensitivity, and temporal resolution that we can perform the measurements on the human genomic DNA contained in cells that were simply lysed. We show that, in few minutes, we identify an individual, even heterozygote, carrying the sequences of the DQB1 gene that confers susceptibility to the development of insulin-dependent diabetes mellitus with no need of DNA extraction, purification, PCR amplification.
Keywords :
DNA; cellular biophysics; diseases; fluorescence; genetics; genomics; high-speed optical techniques; laser mode locking; molecular biophysics; DNA sequences; DQB1 gene; cell lysis; continuous-wave mode-locked laser; donor-acceptor system; fluorescence decay; genetically correlated diseases; heterozygote; high acquisition rate; human genomic DNA; insulin-dependent diabetes mellitus; picosecond-resolved Forster energy transfer; polymorphic human genes; sensitivity; temporal resolution; time-correlated single-photon detection; Annealing; Bioinformatics; Correlation; DNA; Energy exchange; Genomics; Probes; Förster resonance energy transfer; biomedical measurements (sensitivity and specificity); diabetes; fluorescence; genetic expression; molecular biophysics; photodiodes; public healthcare; timing;
Journal_Title :
Selected Topics in Quantum Electronics, IEEE Journal of
DOI :
10.1109/JSTQE.2013.2278216