• DocumentCode
    2055060
  • Title

    Deployment of a Regularized Feature Selection Framework on an Overlay Desktop Grid

  • Author

    Barla, Annalisa ; Ferrante, Marco

  • Author_Institution
    Dipt. di Inf. e Sci. dell´´Inf., Univ. degli Studi di Genova, Genova, Italy
  • fYear
    2009
  • fDate
    14-16 Oct. 2009
  • Firstpage
    103
  • Lastpage
    104
  • Abstract
    We present an inexpensive solution to overcome the computational challenges of a state-of-the art feature selection framework. The algorithm relies on two nested loops of cross validation that allow the optimal choice for the regularization parameters resulting in a computationally expensive procedure. In order to speed up the process, we perform the loops on a desktop grid facility deployed on PCs in computer rooms as virtual machines connected through a VPN. The local grid shares resources with similar grids managed by other North Italian universities.
  • Keywords
    biology computing; feature extraction; knowledge acquisition; molecular biophysics; virtual machines; virtual private networks; North Italian university; VPN; cross validation; local grid; overlay desktop grid; regularized feature selection; virtual machines; Concurrent computing; Data mining; Gene expression; Grid computing; High performance computing; Input variables; Least squares methods; Personal communication networks; Protocols; Resonance light scattering; desktop grid; regularization; variable selection;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    High Performance Computational Systems Biology, 2009. HIBI '09. International Workshop on
  • Conference_Location
    Trento
  • Print_ISBN
    978-0-7695-3809-9
  • Type

    conf

  • DOI
    10.1109/HiBi.2009.15
  • Filename
    5298688