Title :
A two-stage active contour-based scheme for spot detection in proteomics images
Author :
Mylona, Eleftheria ; Savelonas, Michalis ; Maroulis, Dimitris
Author_Institution :
Dept. of Inf. & Telecommun., Univ. of Athens, Athens, Greece
Abstract :
This work introduces a two-stage active contour-based scheme for the detection of protein spots in two-dimensional gel electrophoresis images. The proposed scheme is formulated as an expansion of the Chan-Vese model and is capable of distinguishing overlapping spots. Moreover, it remains unaffected in the presence of noise and the inhomogeneous background that characterize these images. The experimental results demonstrate that the proposed scheme obtains more plausible spot boundaries than PDQuest (BioRad).
Keywords :
electrophoresis; feature extraction; medical image processing; molecular biophysics; noise; proteins; proteomics; BioRad; Chan-Vese model; PDQuest; noise; protein; proteomics images; spot detection; two-dimensional gel electrophoresis images; two-stage active contour-based scheme; Biomedical imaging; Facsimile; Image segmentation; Nonhomogeneous media; Proteins; Proteomics;
Conference_Titel :
Information Technology and Applications in Biomedicine (ITAB), 2010 10th IEEE International Conference on
Conference_Location :
Corfu
Print_ISBN :
978-1-4244-6559-0
DOI :
10.1109/ITAB.2010.5687727