DocumentCode :
2079235
Title :
A novel way of gene regulatory elements identifying
Author :
Wei Liu ; Ling Chen
Author_Institution :
Dept. of Comput. Sci., Yangzhou Univ., Yangzhou, China
fYear :
2011
fDate :
16-18 Dec. 2011
Firstpage :
2130
Lastpage :
2133
Abstract :
Now discovering and recognizing gene regulatory elements have become one of the most important approaches in analysis of genome sequences,but most of the current algorithms for identifying regulatory elements are easily to converge into a local optimum, and have high time complexity. Therefore, we propose a novel optimization algorithm named ACRI(ant-colony-regulatory-identification) for identifying regulatory elements. Based on powerful optimization ability of ant-colony algorithm, the algorithm ACRI can not only improve the quality of results, but also solve the problem at a very high speed. Experimental results show that ACRI can obtain higher quality of solutions using less computational time than other traditional algorithms.
Keywords :
ant colony optimisation; biology computing; genetics; genomics; ACRI; ant-colony-regulatory-identification; computational time; gene regulatory elements identification; genome sequences; optimization algorithm; powerful optimization ability; Algorithm design and analysis; Ant colony optimization; DNA; Integrated circuits; Optimization; Software; Software algorithms; Ant colony optimization; Gene regulatory elements; Optimization algorithm;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Transportation, Mechanical, and Electrical Engineering (TMEE), 2011 International Conference on
Conference_Location :
Changchun
Print_ISBN :
978-1-4577-1700-0
Type :
conf
DOI :
10.1109/TMEE.2011.6199639
Filename :
6199639
Link To Document :
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