• DocumentCode
    2079235
  • Title

    A novel way of gene regulatory elements identifying

  • Author

    Wei Liu ; Ling Chen

  • Author_Institution
    Dept. of Comput. Sci., Yangzhou Univ., Yangzhou, China
  • fYear
    2011
  • fDate
    16-18 Dec. 2011
  • Firstpage
    2130
  • Lastpage
    2133
  • Abstract
    Now discovering and recognizing gene regulatory elements have become one of the most important approaches in analysis of genome sequences,but most of the current algorithms for identifying regulatory elements are easily to converge into a local optimum, and have high time complexity. Therefore, we propose a novel optimization algorithm named ACRI(ant-colony-regulatory-identification) for identifying regulatory elements. Based on powerful optimization ability of ant-colony algorithm, the algorithm ACRI can not only improve the quality of results, but also solve the problem at a very high speed. Experimental results show that ACRI can obtain higher quality of solutions using less computational time than other traditional algorithms.
  • Keywords
    ant colony optimisation; biology computing; genetics; genomics; ACRI; ant-colony-regulatory-identification; computational time; gene regulatory elements identification; genome sequences; optimization algorithm; powerful optimization ability; Algorithm design and analysis; Ant colony optimization; DNA; Integrated circuits; Optimization; Software; Software algorithms; Ant colony optimization; Gene regulatory elements; Optimization algorithm;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Transportation, Mechanical, and Electrical Engineering (TMEE), 2011 International Conference on
  • Conference_Location
    Changchun
  • Print_ISBN
    978-1-4577-1700-0
  • Type

    conf

  • DOI
    10.1109/TMEE.2011.6199639
  • Filename
    6199639