• DocumentCode
    2087177
  • Title

    A Vector-based Filtering Algorithm for Microarray Image

  • Author

    Chen, Xing ; Duan, Huilong

  • Author_Institution
    Zhejiang Univ., Hangzhou
  • fYear
    2007
  • fDate
    23-27 May 2007
  • Firstpage
    794
  • Lastpage
    797
  • Abstract
    This paper presents a simple but effective method capable of processing microarray images. By applying nine directional templates to both of the two components of microarray images, the method is able to remove noise impairments while preserving low-contrast signals. This is based on the knowledge that signal spots should have the same edge features in both two components of microarray images, which can be detected by the directional templates, while noise and uneven background do not have this characteristic. The mathematical morphological filtering is then adopted by using a smaller structural element to remove dispersed noise points. The experimental result indicates that the proposed approach yields good performance in removing noise and enhancing spot location.
  • Keywords
    arrays; biomedical optical imaging; filtering theory; image representation; mathematical morphology; medical image processing; directional templates; mathematical morphological filtering; microarray image processing; vector-based filtering algorithm; Background noise; Bioinformatics; Biomedical engineering; Filtering algorithms; Filters; Fluorescence; Image edge detection; Instruments; Optical imaging; Optical noise; directional template; mathematical morphological filtering; microarray images processing; vector-based filtering;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Complex Medical Engineering, 2007. CME 2007. IEEE/ICME International Conference on
  • Conference_Location
    Beijing
  • Print_ISBN
    978-1-4244-1077-4
  • Electronic_ISBN
    978-1-4244-1078-1
  • Type

    conf

  • DOI
    10.1109/ICCME.2007.4381849
  • Filename
    4381849