• DocumentCode
    2099306
  • Title

    Bio-array image processing and genetic networks modelling

  • Author

    Demongeot, J. ; Berger, F. ; Baum, T.P. ; Thuderoz, F. ; Cohen, O.

  • Author_Institution
    Fac. of Medicine, CNRS, La Tronche, France
  • fYear
    2002
  • fDate
    15-23 June 2002
  • Abstract
    The new tools available for gene expression studies are essentially the bio-array methods using a large variety of physical detectors (isotopes, fluorescent markers, ultrasounds). Here we present an image processing method independent of the detector type, dealing with the noise and with the peaks overlapping, the peaks revealing the detector activity (isotopic in the presented example), correlated with the gene expression. After this first step of image processing, we can extract information about causal influence (activation or inhibition) a gene can exert on other genes, leading to clusters of co-expression in which we extract an interaction matrix explaining the dynamics of co-expression correlated to the studied tissue function.
  • Keywords
    biological tissues; cellular biophysics; genetics; medical image processing; bio-array image processing; detector activity; fluorescent markers; gene expression; genetic networks modelling; isotopes; tissue function; Biomedical imaging; Data mining; Detectors; Gene expression; Genetics; Image processing; Image segmentation; Isotopes; Noise figure; Testing;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging, 2002. 5th IEEE EMBS International Summer School on
  • Print_ISBN
    0-7803-7507-6
  • Type

    conf

  • DOI
    10.1109/SSBI.2002.1234001
  • Filename
    1234001