Title :
Building phylogenetic trees by using gene Nucleotide Genomic Signals
Author_Institution :
Biomed. Eng. Center, Univ. “Politeh.” of Bucharest, Bucharest, Romania
fDate :
Aug. 28 2012-Sept. 1 2012
Abstract :
Nucleotide genomic signal (NuGS) methodology allows a molecular level approach to determine distances between homologous genes or between conserved equivalent non-coding genome regions in various species or individuals of the same species. Therefore, distances between the genes of species or individuals can be computed and phylogenetic trees can be built. The paper illustrates the use of the nucleotide imbalance (N) and nucleotide pair imbalance (P) signals to determine the distances between the genes of several Hominidae. The results are in accordance with those of other genetic or phylogenetic approaches to establish distances between Hominidae species.
Keywords :
bioinformatics; cellular biophysics; genetics; genomics; molecular biophysics; symbol manipulation; Hominidae species; conserved equivalent noncoding genome regions; gene NuGS methodology; homologous gene distances; molecular level approach; nucleotide genomic signals; nucleotide imbalance signals; nucleotide pair imbalance signals; phylogenetic trees; Bioinformatics; DNA; Genomics; Immune system; Phylogeny; Signal processing; Animals; DNA, Mitochondrial; Genomics; HIV Protease; Hominidae; Humans; Phylogeny;
Conference_Titel :
Engineering in Medicine and Biology Society (EMBC), 2012 Annual International Conference of the IEEE
Conference_Location :
San Diego, CA
Print_ISBN :
978-1-4244-4119-8
Electronic_ISBN :
1557-170X
DOI :
10.1109/EMBC.2012.6347251