DocumentCode :
2186633
Title :
Classification models based-on incremental learning algorithm and feature selection on gene expression data
Author :
Saengsiri, Patharawut ; Wichian, Sageemas Na ; Meesad, Phayung ; Herwig, Unger
Author_Institution :
Dept. of Inf. Technol., KMUTNB, Bangkok, Thailand
fYear :
2011
fDate :
17-19 May 2011
Firstpage :
426
Lastpage :
429
Abstract :
Gene expression data is illustration levels of genes that DNA encode into the protein such as muscle or brain cells. However, some abnormal cells may evolve from unnatural expression levels. So, finding a subset of informative gene would be beneficial to biologists because it can help to identify discriminate genes. Unfortunately, genes grow rapidly up into the tens of thousands gene which make it difficult for classifying processes such as curse of dimensionality and misclassification problems. This paper proposes classification models based-on incremental learning algorithm and feature selection on gene expression data. Three feature selection methods: Correlation based Feature Selection (Cfs), Gain Ratio (GR), and Information Gain (Info) combined with Incremental Learning Algorithm based-on Mahalanobis Distance (ILM). Result of the experiment represented proposes models CfsILM, GRILM and InfoILM not only reduce many dimensions, save time-resource but also improve accuracy rate. Particularly, CfsILM was outstanding than other models on three public gene expression datasets.
Keywords :
DNA; feature extraction; learning (artificial intelligence); pattern classification; DNA encode; GRILM; InfoILM; abnormal cell; brain cell; classification model; correlation based feature selection; gain ratio; gene expression data; incremental learning algorithm; information gain; informative gene; mahalanobis distance; misclassification problem; classification; feature selection; gene expression; inclemental learning algorithm;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Electrical Engineering/Electronics, Computer, Telecommunications and Information Technology (ECTI-CON), 2011 8th International Conference on
Conference_Location :
Khon Kaen
Print_ISBN :
978-1-4577-0425-3
Type :
conf
DOI :
10.1109/ECTICON.2011.5947866
Filename :
5947866
Link To Document :
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