• DocumentCode
    2186633
  • Title

    Classification models based-on incremental learning algorithm and feature selection on gene expression data

  • Author

    Saengsiri, Patharawut ; Wichian, Sageemas Na ; Meesad, Phayung ; Herwig, Unger

  • Author_Institution
    Dept. of Inf. Technol., KMUTNB, Bangkok, Thailand
  • fYear
    2011
  • fDate
    17-19 May 2011
  • Firstpage
    426
  • Lastpage
    429
  • Abstract
    Gene expression data is illustration levels of genes that DNA encode into the protein such as muscle or brain cells. However, some abnormal cells may evolve from unnatural expression levels. So, finding a subset of informative gene would be beneficial to biologists because it can help to identify discriminate genes. Unfortunately, genes grow rapidly up into the tens of thousands gene which make it difficult for classifying processes such as curse of dimensionality and misclassification problems. This paper proposes classification models based-on incremental learning algorithm and feature selection on gene expression data. Three feature selection methods: Correlation based Feature Selection (Cfs), Gain Ratio (GR), and Information Gain (Info) combined with Incremental Learning Algorithm based-on Mahalanobis Distance (ILM). Result of the experiment represented proposes models CfsILM, GRILM and InfoILM not only reduce many dimensions, save time-resource but also improve accuracy rate. Particularly, CfsILM was outstanding than other models on three public gene expression datasets.
  • Keywords
    DNA; feature extraction; learning (artificial intelligence); pattern classification; DNA encode; GRILM; InfoILM; abnormal cell; brain cell; classification model; correlation based feature selection; gain ratio; gene expression data; incremental learning algorithm; information gain; informative gene; mahalanobis distance; misclassification problem; classification; feature selection; gene expression; inclemental learning algorithm;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Electrical Engineering/Electronics, Computer, Telecommunications and Information Technology (ECTI-CON), 2011 8th International Conference on
  • Conference_Location
    Khon Kaen
  • Print_ISBN
    978-1-4577-0425-3
  • Type

    conf

  • DOI
    10.1109/ECTICON.2011.5947866
  • Filename
    5947866