Title :
Parallel multi-scale computation using the message passing interface
Author :
Fox, B. ; Liu, P. ; Lu, C. ; Lee, H.P.
Author_Institution :
Inst. of High Performance Comput., Singapore, Singapore
Abstract :
A sequential three-dimensional hybrid molecular-dynamics (MD)/finite-element (FE) code to perform continuum and atomistic multi-scale modeling and computation, has been parallelized using the message passing interface (MPI) library. A master-slave divide-and-conquer approach, emphasizing the functionality and robustness of the code, is implemented through loop parallelism and has reduced execution time: yielding a speedup of greater than 3 and has shown potential for further speedup. The smoothness of the stress distribution across the overlapping region between the continuum domain and the atomistic domain demonstrates the suitability of this method to nanostructure modeling.
Keywords :
chemistry computing; distributed memory systems; divide and conquer methods; finite element analysis; message passing; molecular dynamics method; parallel processing; physics computing; FE code; MD code; MPI library; atomistic domain; continuum domain; finite element; loop parallelism; master-slave divide-and-conquer approach; message passing interface; molecular dynamics; nanostructure modeling; parallel multiscale computation; stress distribution; Computational modeling; Computer interfaces; Concurrent computing; Finite element methods; Iron; Libraries; Master-slave; Message passing; Parallel processing; Robustness;
Conference_Titel :
Parallel Processing Workshops, 2003. Proceedings. 2003 International Conference on
Print_ISBN :
0-7695-2018-9
DOI :
10.1109/ICPPW.2003.1240371