DocumentCode
2285375
Title
cDNA microarray image analysis
Author
Tozduman, Ersin ; Albayrak, Songül
Author_Institution
Bilgisayar Muhendisligi Bolumu, Yildiz Teknik Univ., Istanbul, Turkey
fYear
2009
fDate
20-22 May 2009
Firstpage
1
Lastpage
4
Abstract
cDNA microarray image analysis has grown very important these days because of the growing field which it´s part of: microarray expression analysis. In this work we propose a new cDNA microarray image analysis system. A cDNA microarray analysis system consists of three main parts which are gridding, segmentation and information extraction, respectively. In gridding stage we propose a new automated gridding technique which is based on mathematical morphology. For segmentation we propose two different algorithm which are based on K-Means clustering and Fuzzy C-Means clustering respectively. On the final stage, information extraction, our proposed system uses a classical approach which calculates background values locally. The proposed system has open parts in the way of developement and is still being worked on.
Keywords
DNA; arrays; feature extraction; fuzzy control; grid computing; image segmentation; medical image processing; molecular biophysics; K-means clustering; automated gridding technique; cDNA microarray; fuzzy C-means clustering; image analysis; image information extraction; image segmentation; microarray expression analysis; Bioinformatics; Clustering algorithms; DNA; Data mining; Genomics; Image analysis; Image segmentation; Information analysis; Instruments; Morphology;
fLanguage
English
Publisher
ieee
Conference_Titel
Biomedical Engineering Meeting, 2009. BIYOMUT 2009. 14th National
Conference_Location
Balcova, Izmir
Print_ISBN
978-1-4244-3605-7
Electronic_ISBN
978-1-4244-3606-4
Type
conf
DOI
10.1109/BIYOMUT.2009.5130308
Filename
5130308
Link To Document