Title :
HMMlib: A C++ Library for General Hidden Markov Models Exploiting Modern CPUs
Author :
Sand, Andreas ; Pedersen, Christian N S ; Mailund, Thomas ; Brask, Asbjørn Tølbøl
Author_Institution :
Bioinf. Res. Centre, Aarhus Univ., Aarhus, Denmark
fDate :
Sept. 30 2010-Oct. 1 2010
Abstract :
We present a C++ library for constructing and analyzing general hidden Markov models. The library consists of a number of template classes and generic functions, parameterized with the precision of floating point types and different types of hardware acceleration.
Keywords :
C++ language; electronic engineering computing; hidden Markov models; microcomputers; software libraries; C++ library; HMMlib; floating point type; hardware acceleration; hidden Markov model; modern CPU; template class; HMMlib; Hidden Markov Models; OpenMP; SSE;
Conference_Titel :
Parallel and Distributed Methods in Verification, 2010 Ninth International Workshop on, and High Performance Computational Systems Biology, Second International Workshop on
Conference_Location :
Enschede
Print_ISBN :
978-0-7695-4265-2
DOI :
10.1109/PDMC-HiBi.2010.24
