• DocumentCode
    2309017
  • Title

    Knowledge Extraction and Extrapolation Using Ancient and Modern Biomedical Literature

  • Author

    Vaka, Harsha Gopal Goud ; Mukhopadhyay, Snehasis

  • Author_Institution
    Dept. of Comput. & Inf. Sci., Indiana Univ., Indianapolis, IN
  • fYear
    2009
  • fDate
    26-29 May 2009
  • Firstpage
    996
  • Lastpage
    1001
  • Abstract
    Extraction of knowledge from biomedical literature is one of the major problems for researchers. This primarily involves identification of novel associations between biological objects (genes, proteins, diseases, medicines etc.). These associations are commonly extracted by mining biomedical resources such as the PUBMED which contains a large volume of information. An automated approach towards this end will reduce a substantial amount of time for biomedical researchers. In this paper we discuss a methodology to extract such associations and to assign a significance measure to the generated hypotheses. The computed significance value for the extracted knowledge can be considered as association strength between biological objects. The generated hypotheses with large significance can be considered for further experimental validation by biologists. In this paper we conduct two different validation studies of the results, which provide justification for the approach that was followed to generate the hypotheses.
  • Keywords
    data mining; knowledge acquisition; medical administrative data processing; PUBMED; association strength; biomedical literature; biomedical resources mining; knowledge extraction; knowledge extrapolation; Biology computing; Biomedical computing; Biomedical measurements; Data mining; Databases; Diseases; Drugs; Extrapolation; Proteins; Text mining; Association Extraction; Ayurveda; Text Mining; Transitive Closure;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Advanced Information Networking and Applications Workshops, 2009. WAINA '09. International Conference on
  • Conference_Location
    Bradford
  • Print_ISBN
    978-1-4244-3999-7
  • Electronic_ISBN
    978-0-7695-3639-2
  • Type

    conf

  • DOI
    10.1109/WAINA.2009.44
  • Filename
    5136781