DocumentCode
2309017
Title
Knowledge Extraction and Extrapolation Using Ancient and Modern Biomedical Literature
Author
Vaka, Harsha Gopal Goud ; Mukhopadhyay, Snehasis
Author_Institution
Dept. of Comput. & Inf. Sci., Indiana Univ., Indianapolis, IN
fYear
2009
fDate
26-29 May 2009
Firstpage
996
Lastpage
1001
Abstract
Extraction of knowledge from biomedical literature is one of the major problems for researchers. This primarily involves identification of novel associations between biological objects (genes, proteins, diseases, medicines etc.). These associations are commonly extracted by mining biomedical resources such as the PUBMED which contains a large volume of information. An automated approach towards this end will reduce a substantial amount of time for biomedical researchers. In this paper we discuss a methodology to extract such associations and to assign a significance measure to the generated hypotheses. The computed significance value for the extracted knowledge can be considered as association strength between biological objects. The generated hypotheses with large significance can be considered for further experimental validation by biologists. In this paper we conduct two different validation studies of the results, which provide justification for the approach that was followed to generate the hypotheses.
Keywords
data mining; knowledge acquisition; medical administrative data processing; PUBMED; association strength; biomedical literature; biomedical resources mining; knowledge extraction; knowledge extrapolation; Biology computing; Biomedical computing; Biomedical measurements; Data mining; Databases; Diseases; Drugs; Extrapolation; Proteins; Text mining; Association Extraction; Ayurveda; Text Mining; Transitive Closure;
fLanguage
English
Publisher
ieee
Conference_Titel
Advanced Information Networking and Applications Workshops, 2009. WAINA '09. International Conference on
Conference_Location
Bradford
Print_ISBN
978-1-4244-3999-7
Electronic_ISBN
978-0-7695-3639-2
Type
conf
DOI
10.1109/WAINA.2009.44
Filename
5136781
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