DocumentCode :
2326983
Title :
Multi-objective optimization using genetic algorithm for gene selection from microarray data
Author :
Mohamad, Mohd Shahidan ; Omatu, Sigeru ; Deris, Safaai ; Yoshioka, Michifumi
Author_Institution :
Dept. of Comput. Sci. & Intell. Syst., Osaka Prefecture Univ., Sakai
fYear :
2008
fDate :
13-15 May 2008
Firstpage :
1331
Lastpage :
1334
Abstract :
Microarray technology has been increasingly used in cancer research because of its potential for measuring expression levels of thousands of genes simultaneously in tissue samples. It is used to collect the information from tissue samples regarding gene expression differences that could be useful for cancer classification. However, this classification task faces many challenges due to availability of a smaller number of samples compared to the huge number of genes, and many of the genes are not relevant to the classification. It has been shown that selecting a small subset of genes can lead to an improved accuracy of the classification. Hence, this paper proposes a solution to the problem of gene selection by using a multi-objective approach in genetic algorithm. This approach is experimented on two microarray data sets such as lung cancer and mixed-lineage leukemia cancer. It obtains encouraging result on those data sets as compared with an approach that uses single objective approach.
Keywords :
biological tissues; cancer; genetic algorithms; genetics; medical computing; cancer classification; gene expression; gene selection; genetic algorithm; lung cancer; microarray data; mixed-lineage leukemia cancer; multiobjective optimization; tissue sample; Cancer; Computer science; Data engineering; Filters; Gene expression; Genetic algorithms; Genetic engineering; Intelligent systems; Software engineering; Space technology;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Computer and Communication Engineering, 2008. ICCCE 2008. International Conference on
Conference_Location :
Kuala Lumpur
Print_ISBN :
978-1-4244-1691-2
Electronic_ISBN :
978-1-4244-1692-9
Type :
conf
DOI :
10.1109/ICCCE.2008.4580821
Filename :
4580821
Link To Document :
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