• DocumentCode
    2349802
  • Title

    PADMA Database: Pathogen Associated Drosophila MicroArray Database

  • Author

    Kawaguchi, Akira ; Mondal, Ariful ; Montesdeoca, Nelson ; Govind, Shubha ; Lee, Mark J.

  • Author_Institution
    Comput. Sci. Dept., City Coll. of New York, New York, NY, USA
  • fYear
    2009
  • fDate
    2-4 April 2009
  • Firstpage
    63
  • Lastpage
    66
  • Abstract
    We present the development of new database, called PADMA, for easy retrieval of genes whose expression is altered by parasitoid infections. The database also houses gene expression data sets from Drosophila blood cells after immune activation. The PADMA system will allow a user to compare genes whose expression is altered after infection by a single or multiple pathogens. Such capability is not publicly available to the Drosophila research community. The PADMA system is currently being tested in-house for public release. We describe the motivation for this research and a detailed account on the design of the database to promote data sharing among users and applications in the context of genome biology.
  • Keywords
    genomics; information retrieval; medical information systems; Drosophila blood cells; PADMA database; data retrieval; data sharing; gene expression; genome biology; pathogen associated Drosophila microarray database; Bioinformatics; Blood; Cells (biology); Databases; Gene expression; Genomics; Immune system; Information retrieval; Pathogens; System testing; biology data-warehouse; biology database; drosophila gene data; drosophila microarray; gene database;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Computing, Engineering and Information, 2009. ICC '09. International Conference on
  • Conference_Location
    Fullerton, CA
  • Print_ISBN
    978-0-7695-3538-8
  • Type

    conf

  • DOI
    10.1109/ICC.2009.62
  • Filename
    5328928