Title :
An ontology-empowered model for annotating protein-protein interaction data: a case study for budding yeast
Author :
Shaban-Nejad, Arash ; Haarslev, Volker
Author_Institution :
Dept. Computer Science and Software Eng., Concordia University, Montreal, Quebec, H3H2J8, Canada
Abstract :
This paper reports on our experience in modeling and employing ontology-inferred knowledge to support and improve data mining tasks of yeast protein interactions for knowledge discovery. This objective has been accomplished by providing simplified access to units of intersecting proteome data and information from different biological databases and bio-ontologies, and utilizing a logical framework to answer questions from biologists.
Keywords :
Biological system modeling; Computer science; Data mining; Databases; Fungi; Gene expression; Ontologies; Organisms; Proteins; Scattering;
Conference_Titel :
Information Reuse and Integration, 2008. IRI 2008. IEEE International Conference on
Conference_Location :
Las Vegas, NV, USA
Print_ISBN :
978-1-4244-2659-1
Electronic_ISBN :
978-1-4244-2660-7
DOI :
10.1109/IRI.2008.4583057
