• DocumentCode
    2356395
  • Title

    Wavelet feature selection for microarray data

  • Author

    Liu, Yihui

  • Author_Institution
    Shandong Inst. of Light Ind., Jinan
  • fYear
    2007
  • fDate
    8-9 Nov. 2007
  • Firstpage
    205
  • Lastpage
    208
  • Abstract
    A hybrid method of feature selection based on wavelet analysis and genetic algorithm (GA) is proposed in this study for high dimensional microarray data. A set of orthogonal wavelet approximation coefficients based on wavelet decomposition are extracted to compress the gene profiles and reduce the dimensionality of microarray data. Then genetic algorithm is performed to select the optimized features from approximation coefficients. Linear discriminant analysis (LDA) is employed to evaluate the classification performance. Experiments are performed on four datasets. Our results show that this hybrid method is efficient and robust
  • Keywords
    cellular biophysics; discrete wavelet transforms; genetic algorithms; genetics; medical diagnostic computing; gene profiles; genetic algorithm; linear discriminant analysis; microarray data; wavelet analysis; wavelet approximation coefficients; wavelet decomposition; wavelet feature selection; DNA; Data mining; Decision trees; Discrete wavelet transforms; Gene expression; Genetic algorithms; Least squares approximation; Linear discriminant analysis; Robustness; Wavelet analysis;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Life Science Systems and Applications Workshop, 2007. LISA 2007. IEEE/NIH
  • Conference_Location
    Bethesda, MD
  • Print_ISBN
    978-1-4244-1813-8
  • Electronic_ISBN
    978-1-4244-1813-8
  • Type

    conf

  • DOI
    10.1109/LSSA.2007.4400920
  • Filename
    4400920