DocumentCode
2379093
Title
Prediction of coding region in the DNA sequences
Author
Jleed, Hitham ; Agaian, Sos
Author_Institution
Dept. of Electr. & Comput. Eng., Univ. of Texas at San Antonio, San Antonio, TX, USA
fYear
2011
fDate
9-12 Oct. 2011
Firstpage
1128
Lastpage
1133
Abstract
In this paper, we propose a new algorithm based on Fourier spectral characteristics. This technique improves the coding prediction accuracy, boosting the protein coding region and suppressing the non-coding region within the DNA sequences. We also compare this algorithm using computer simulation with commonly used techniques showing that our technique for exon region prediction provides superior properties for the separation of exon and intron regions.
Keywords
DNA; Fourier transform spectra; biology computing; encoding; proteins; DNA sequences; Fourier spectral characteristics; coding region prediction; computer simulation; exon region prediction; intron regions; protein coding region; DNA; Digital filters; Discrete Fourier transforms; Encoding; Prediction algorithms; Proteins; DNA; Discrete Fourier transforms; Receiver operating characteristic; indicator sequence;
fLanguage
English
Publisher
ieee
Conference_Titel
Systems, Man, and Cybernetics (SMC), 2011 IEEE International Conference on
Conference_Location
Anchorage, AK
ISSN
1062-922X
Print_ISBN
978-1-4577-0652-3
Type
conf
DOI
10.1109/ICSMC.2011.6083826
Filename
6083826
Link To Document