DocumentCode
2379441
Title
BindSDb: A binding-information spatial database
Author
Roqueiro, Damian ; Frasor, Jonna ; Dai, Yang
Author_Institution
Dept. of Bioeng., Univ. of Illinois at Chicago, Chicago, IL, USA
fYear
2010
fDate
18-18 Dec. 2010
Firstpage
573
Lastpage
578
Abstract
We have developed a database that stores experimental binding data and predicted transcription factor binding sites. All true and putative binding sites are stored in conjunction with the latest assembly of the human genome in a spatial database that answers user-input queries about topological relationships between the genes, binding sites and transcription factors.
Keywords
bioinformatics; genetics; genomics; topology; visual databases; bindSDb; binding data; binding-information spatial database; genes; human genome; putative binding sites; topological relationships; transcription factor binding sites; user-input queries; binding data; genomic data; prediction of transcription factor binding sites; spatial database; topological queries;
fLanguage
English
Publisher
ieee
Conference_Titel
Bioinformatics and Biomedicine Workshops (BIBMW), 2010 IEEE International Conference on
Conference_Location
Hong, Kong
Print_ISBN
978-1-4244-8303-7
Electronic_ISBN
978-1-4244-8304-4
Type
conf
DOI
10.1109/BIBMW.2010.5703864
Filename
5703864
Link To Document