Title :
Almost-uniform sampling of rotations for conformational searches in Robotics and Structural Biology
Author :
Yan, Yan ; Chirikjian, Gregory S.
Author_Institution :
Dept. of Mech. Eng., Johns Hopkins Univ., Baltimore, MD, USA
Abstract :
We propose a new method for sampling the rotation group that involves decomposing it into identical Voronoi cells centered on rotational symmetry operations of the Platonic solids. Within each cell, Cartesian grids in exponential coordinates are used to achieve almost-uniform sampling at any level of resolution, without having to store large numbers of coordinates, and without requiring sophisticated data structures. We analyze the shape of these cells, and explain how this new method can be used in the context of conformational searches in the fields of Robotics and Structural Biology.
Keywords :
biocomputing; computational geometry; robots; Cartesian grids; conformational searches; exponential coordinates; identical Voronoi cells; platonic solids; robotics; rotational symmetry operations; rotations almost-uniform sampling; sophisticated data structures; structural biology; Biology; Distortion measurement; Jacobian matrices; Sampling methods; Shape; Solids;
Conference_Titel :
Robotics and Automation (ICRA), 2012 IEEE International Conference on
Conference_Location :
Saint Paul, MN
Print_ISBN :
978-1-4673-1403-9
Electronic_ISBN :
1050-4729
DOI :
10.1109/ICRA.2012.6225326